oxygenic photosynthesis
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PHOTOALL-PWY
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fructose-1,6-bisphosphatase class 1|D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase [Slr2094]4|phosphoglycerate kinase|triosephosphate isomerase|ferredoxin-NADP oxidoreductase|transketolase|photosystem I|glyceraldehyde 3-phosphate dehydrogenase 2|phosphoribulokinase|fructose-bisphosphate aldolase / sedoheptulose-1,7-bisphosphate aldolase|ribose 5-phosphate isomerase|D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase|pentose-5-phosphate 3-epimerase|ribulose bisphosphate carboxylase/oxygenase
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D-ribulose 5-phosphate|D-xylulose 5-phosphate|H2O|NADPH|3-phospho-D-glycerate|β-D-fructofuranose 6-phosphate|hν|NADP+|glycerone phosphate|D-sedoheptulose 7-phosphate|fructose 1,6-bisphosphate|D-sedoheptulose-1,7-bisphosphate|D-glyceraldehyde 3-phosphate|D-ribulose-1,5-bisphosphate|H+|D-erythrose 4-phosphate|phosphate|CO2|oxygen|1,3-bisphospho-D-glycerate
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157
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gluconeogenesis III
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PWY66-399
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alpha enolase|glucose-6-phosphate isomerase|testis-specific glyceraldehyde-3-phosphate dehydrogenase|fructose-bisphosphate aldolase C|glyceraldehyde-3-phosphate dehydrogenase|glucose-6-phosphatase 3|phosphoglycerate kinase 2|triosephosphate isomerase|fructose-1,6-bisphosphatase 2|beta enolase|phosphoglycerate mutase 1|fructose-bisphosphate aldolase B|phosphoglycerate kinase 1|glucose-6-phosphatase 2|glucose-6-phosphatase|mitochondrial malate dehydrogenase|fructose-bisphosphate aldolase A|gamma enolase|fructose-1,6-bisphosphatase 1|bisphosphoglycerate mutase|phosphoglycerate mutase 2|cytosolic malate dehydrogenase|pyruvate carboxylase, mitochondrial|phosphoenolpyruvate carboxykinase, cytosolic [GTP]
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H2O|2-phospho-D-glycerate|NAD+|3-phospho-D-glycerate|D-glucopyranose 6-phosphate|(S)-malate|hydrogen carbonate|phosphoenolpyruvate|CO2|β-D-fructofuranose 6-phosphate|oxaloacetate|fructose 1,6-bisphosphate|D-glyceraldehyde 3-phosphate|H+|phosphate|glycerone phosphate|pyruvate|NADH|1,3-bisphospho-D-glycerate
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154
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superpathway of L-lysine, L-threonine and L-methionine biosynthesis II
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PWY-724
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aspartate semialdehyde dehydrogenase|homocysteine S-methyltransferase|cystathionine β-lyase|L,L-diaminopimelate aminotransferase|methionine synthase|cystathionine γ-synthase / selenocystathione synthase [CGS1]4|diaminopimelate decarboxylase|aspartate kinase|homoserine kinase|cystathionine γ-synthase / selenocystathione synthase
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S-adenosyl-L-methionine|NADPH|L,L-diaminopimelate|L-cysteine|H2O|meso-diaminopimelate|L-homocysteine|NADP+|L-glutamate|L-homoserine|phosphate|pyruvate|CO2|L-cystathionine|2-aminoprop-2-enoate|N5-methyl--tetrahydropteroyl tri-L-glutamate|L-methionine|L-aspartyl-4-phosphate|tetrahydropteroyl tri-L-glutamate|L-lysine|L-threonine|L-aspartate-semialdehyde|L-aspartate|S-methyl-L-methionine|(S)-2,3,4,5-tetrahydrodipicolinate|O-phospho-L-homoserine|H+|S-adenosyl-L-homocysteine|2-oxoglutarate|(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
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153
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gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
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triosephosphate isomerase|phosphoenolpyruvate carboxylase|pyruvate carboxylase|2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2|glyceraldehyde-3-phosphate ferredoxin oxidoreductase gor|ADP-dependent phosphofructokinase [PfkA]4|H2-forming methylene-H4MPT dehydrogenase [Hmd]4|carbonic anhydrase|F420-dependent methylene-H4MPT reductase [Mer]4|phosphopyruvate hydratase|methenyl-H4MPT cyclohydrolase|pyruvate synthase|formylmethanofuran dehydrogenase, molybdenum enzyme|2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1|formylmethanofuran:H4MPT formyltransferase|formylmethanofuran dehydrogenase, tungsten enzyme|H2-forming methylene-H4MPT dehydrogenase|F420-dependent methylene-H4MPT reductase
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tetrahydromethanopterin|a formyl-methanofuran|5-formyl-tetrahydromethanopterin|H2O|acetyl-CoA|β-D-fructofuranose 6-phosphate|N5-methyltetrahydromethanopterin|hydrogen carbonate|oxaloacetate|D-glyceraldehyde 3-phosphate|phosphate|pyruvate|CO2|phosphoenolpyruvate|5,10-methenyltetrahydromethanopterin|a reduced coenzyme F420|coenzyme A|carbon monoxide|3-phospho-D-glycerate|2-phospho-D-glycerate|H2|fructose 1,6-bisphosphate|glycerone phosphate|H+|5,10-methylene-tetrahydromethanopterin|D-glucopyranose 6-phosphate
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153
|
anhydromuropeptides recycling
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PWY0-1261
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UDP-N-acetylmuramate:L-alanyl-γ-D-glutamyl-meso-diaminoheptanedioate-D-alanine ligase [multifunctional]|murein DD-endopeptidase / murein LD-carboxypeptidase|anhydro-N-acetylmuramic acid kinase|N-acetylglucosamine-6-phosphate deacetylase|N-acetylmuramic acid 6-phosphate etherase|N-acetyl-anhydromuramyl-L-alanine amidase|L,D-carboxypeptidase A|β-N-acetylhexosaminidase|fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase|anhydro-N-acetylmuramic acid kinase anmK|fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase [GlmU]3|phosphoglucosamine mutase|anhydro-N-acetylmuramoyl-L-alanine amidase|UDP-N-acetylmuramate:L-alanyl-γ-D-glutamyl-meso-diaminoheptanedioate-D-alanine ligase [multifunctional] mpl|β-N-acetylhexosaminidase nagZ|N-acetylmuramic acid 6-phosphate etherase [MurQ]2|muropeptide:H+ symporter ampG|N-acetylmuramic acid PTS permease [MurP][Crr]
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D-glucosamine 6-phosphate|N-acetyl-D-glucosamine 6-phosphate|UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate|UDP-N-acetyl-α-D-glucosamine|(R)-lactate|H2O|acetyl-CoA|UDP-N-acetyl-α-D-muramate|phosphate|D-glucosamine 1-phosphate|acetate|L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine|1,6-anhydro-N-acetyl-β-muramate|L-alanyl-γ-D-glutamyl-meso-diaminopimelate|N-acetyl-β-muramate 6-phosphate|coenzyme A|N-acetyl-α-D-glucosamine 1-phosphate|diphosphate|N-acetyl-β-D-glucosamine|GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala|D-alanine|H+|N-acetyl-β-D-glucosamine(anhydrous)-N-acetylmuramate
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149
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superpathway of L-phenylalanine biosynthesis
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PWY-6628
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chorismate mutase / prephenate dehydrogenase|branched-chain amino-acid aminotransferase|aspartate aminotransferase, PLP-dependent|shikimate kinase II|shikimate dehydrogenase / quinate dehydrogenase|chorismate synthase|3-dehydroquinate dehydratase|tyrosine aminotransferase|shikimate dehydrogenase / quinate dehydrogenase [YdiB]2|3-phosphoshikimate-1-carboxyvinyltransferase|3-dehydroquinate synthase|shikimate dehydrogenase|chorismate mutase / prephenate dehydratase|2-dehydro-3-deoxyphosphoheptonate aldolase
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L-glutamate|H2O|NADPH|3-deoxy-D-arabino-heptulosonate 7-phosphate|2-oxo-3-phenylpropanoate|shikimate|5-enolpyruvoyl-shikimate 3-phosphate|NADP+|phosphoenolpyruvate|3-dehydroshikimate|chorismate|prephenate|shikimate 3-phosphate|3-dehydroquinate|H+|D-erythrose 4-phosphate|phosphate|2-oxoglutarate|CO2|L-phenylalanine
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148
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UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
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PWY-6387
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UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase|UDP-N-acetylglucosamine enolpyruvoyl transferase|D-alanine-D-alanine ligase B|glutamate racemase|UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase|D-alanyl-D-alanine-adding enzyme|UDP-N-acetylmuramate-alanine ligase|UDP-N-acetylenolpyruvoylglucosamine reductase|D-alanine-D-alanine ligase A
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UDP-N-acetyl-α-D-glucosamine-enolpyruvate|NADPH|meso-diaminopimelate|UDP-N-acetyl-α-D-muramate|UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate|NADP+|L-alanine|UDP-N-acetyl-α-D-glucosamine|L-glutamate|phosphoenolpyruvate|D-alanine|H+|phosphate|D-alanyl-D-alanine|D-glutamate|UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine|UDP-N-acetyl-α-D-muramoyl-L-alanine
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147
|
superpathway of L-tyrosine biosynthesis
|
PWY-6630
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chorismate mutase / prephenate dehydrogenase|aspartate aminotransferase, PLP-dependent|shikimate kinase II|shikimate dehydrogenase / quinate dehydrogenase|chorismate synthase|3-dehydroquinate dehydratase|tyrosine aminotransferase|shikimate dehydrogenase|3-phosphoshikimate-1-carboxyvinyltransferase|3-dehydroquinate synthase|shikimate dehydrogenase / quinate dehydrogenase [YdiB]2|chorismate mutase / prephenate dehydratase|2-dehydro-3-deoxyphosphoheptonate aldolase
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NADPH|shikimate 3-phosphate|chorismate|H2O|NAD+|NADP+|4-hydroxyphenylpyruvate|3-dehydroshikimate|L-glutamate|phosphate|CO2|D-erythrose 4-phosphate|L-tyrosine|shikimate|phosphoenolpyruvate|prephenate|5-enolpyruvoyl-shikimate 3-phosphate|3-deoxy-D-arabino-heptulosonate 7-phosphate|3-dehydroquinate|H+|2-oxoglutarate|NADH
|
145
|
superpathway of L-threonine biosynthesis
|
THRESYN-PWY
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aspartate semialdehyde dehydrogenase|aspartate aminotransferase, PLP-dependent|homoserine kinase|aspartate kinase III|aspartate kinase / homoserine dehydrogenase|threonine synthase
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H2O|NADPH|L-homoserine|L-aspartyl-4-phosphate|NADP+|L-aspartate|oxaloacetate|L-glutamate|L-aspartate-semialdehyde|L-threonine|H+|phosphate|2-oxoglutarate|O-phospho-L-homoserine
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144
|
methylaspartate cycle
|
PWY-6728
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β-methylmalyl-CoA lyase|methylmalonyl-CoA mutase|isocitrate dehydrogenase, NADP|glutamate mutase|apparent malate synthase|methylaspartate ammonia-lyase|propionyl-CoA carboxylase|mesaconyl-CoA hydratase|mesaconate:succinyl-CoA CoA transferase|citrate synthase
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fumarate|NADPH|(S)-methylmalonyl-CoA|2-methylfumaryl-CoA|hydrogen carbonate|(2S, 3S)-3-methylaspartate|ammonium|H2O|NAD+|acetyl-CoA|propanoyl-CoA|NADP+|glyoxylate|oxaloacetate|L-glutamate|D-threo-isocitrate|phosphate|CO2|citrate|(S)-malate|succinate|(2R,3S)-β-methylmalyl-CoA|coenzyme A|(R)-methylmalonyl-CoA|mesaconate|H+|succinyl-CoA|cis-aconitate|2-oxoglutarate|NADH
|
143
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