|
superpathway of L-methionine biosynthesis (transsulfuration)
|
PWY-5347
|
aspartate semialdehyde dehydrogenase|O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase|aspartate aminotransferase, PLP-dependent|cystathionine-β-lyase / L-cysteine desulfhydrase|aspartate kinase III|homoserine O-succinyltransferase|cobalamin-dependent methionine synthase|aspartate kinase / homoserine dehydrogenase|homoserine O-succinyltransferase [MetA]2|O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase [MetB]4|bifunctional β-cystathionase, PLP-dependent and regulator of maltose regulon|cobalamin-independent homocysteine transmethylase
|
NADPH|L-cysteine|L-homocysteine|NADP+|O-succinyl-L-homoserine|oxaloacetate|L-glutamate|L-homoserine|phosphate|L-cystathionine|2-aminoprop-2-enoate|N5-methyl--tetrahydropteroyl tri-L-glutamate|L-methionine|a tetrahydrofolate|L-aspartyl-4-phosphate|tetrahydropteroyl tri-L-glutamate|an N5-methyl-tetrahydrofolate|succinate|coenzyme A|L-aspartate-semialdehyde|L-aspartate|H+|succinyl-CoA|2-oxoglutarate
|
168
|
|
L-arginine biosynthesis I (via L-ornithine)
|
ARGSYN-PWY
|
4-aminobutyrate aminotransferase|acetylglutamate kinase|ornithine carbamoyltransferase chain I|argininosuccinate lyase|ornithine carbamoyltransferase chain F|carbamoyl phosphate synthetase|acetylornithine deacetylase|N-acetylglutamate synthase|N-acetylglutamylphosphate reductase|N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase
|
N-acetyl-L-glutamate 5-semialdehyde|fumarate|NADPH|L-glutamine|NADP+|L-ornithine|L-arginino-succinate|N-acetylglutamyl-phosphate|H2O|acetyl-CoA|hydrogen carbonate|L-glutamate|N-acetyl-L-glutamate|coenzyme A|acetate|L-arginine|phosphate|N-acetyl-L-ornithine|carbamoyl phosphate|diphosphate|L-aspartate|L-citrulline|H+|2-oxoglutarate
|
167
|
|
adenosine ribonucleotides de novo biosynthesis
|
PWY-7219
|
adenylate kinase isoenzyme 5|adenylosuccinate synthetase|adenylate kinase|adenylosuccinate lyase
|
fumarate|H2O|L-aspartate|adenylo-succinate|H+|phosphate
|
166
|
|
superpathway of fermentation (Chlamydomonas reinhardtii)
|
PWY4LZ-257
|
pyruvate decarboxylase|pyruvate:ferredoxin oxidoreductase|acetate kinase|D-lactate dehydrogenase|pyruvate formate lyase|Fe hydrogenase|phosphate acetyltransferase|alcohol dehydrogenase / acetaldehyde dehydrogenase
|
(R)-lactate|acetate|NAD+|acetyl-CoA|H2|acetyl phosphate|CO2|acetaldehyde|H+|phosphate|formate|pyruvate|NADH|ethanol|coenzyme A
|
163
|
|
superpathway of pyrimidine deoxyribonucleoside salvage
|
PWY-7200
|
deoxycytidine kinase|nucleoside-diphosphate kinase 1|cytidine/deoxycytidine deaminase|nucleoside diphosphate kinase|cytidine deaminase|thymidylate synthase|thymidine kinase|thymidylate kinase|deoxynucleoside kinase|deoxyadenosine/deoxycytidine kinase|UMP/CMP kinase|thymidine kinase 1b|thymidine kinase 2|thymidine kinase 1|thymidine kinase 1a
|
2-deoxyuridine|H2O|a nucleoside diphosphate|thymidine|H+|ammonium|a 5,10-methylene-tetrahydrofolate|a 7,8-dihydrofolate|2-deoxycytidine
|
163
|
|
petroselinate biosynthesis
|
PWY-5367
|
3-oxoacyl-[acyl-carrier-protein] synthase KAS I|acyl-[acp] 4-desaturase|3-oxoacyl-[acyl-carrier-protein] reductase [FabG]4|3-oxoacyl-[acyl-carrier-protein] synthase|acyl-[acyl-carrier-protein] 4/9-desaturase
|
H2O|NADPH|NADP+|petroselinate|H+|CO2|oxygen
|
160
|
|
anaerobic energy metabolism (invertebrates, cytosol)
|
PWY-7383
|
phosphoenolpyruvate carboxykinase|pyruvate kinase|alanine transaminase|aspartate transaminase|alanine racemase|malate dehydrogenase
|
IDP|NAD+|2-oxoglutarate|(S)-malate|oxaloacetate|L-alanine|CO2|ITP|L-glutamate|phosphoenolpyruvate|D-alanine|H+|L-aspartate|pyruvate|NADH
|
160
|
|
L-arginine biosynthesis II (acetyl cycle)
|
ARGSYNBSUB-PWY
|
acetylglutamate kinase|acetylglutamate synthase|carbamoyl-phosphate synthetase, arginine specific|argininosuccinate lyase|ornithine carbamoyltransferase|L-glutamate N-acetyltransferase|N-acetylglutamylphosphate reductase|argininosuccinase|acetylglutamate kinase / N-acetyl-γ-glutamyl-phosphate reductase|arginosuccinate synthetase|acetylornithine acetyltransferase|ornithine acetyltransferase / N-acetylglutamate synthase|argininosuccinate synthase|acetylornithine aminotransferase
|
N-acetyl-L-glutamate 5-semialdehyde|fumarate|NADPH|L-glutamine|NADP+|L-ornithine|L-arginino-succinate|N-acetylglutamyl-phosphate|H2O|acetyl-CoA|hydrogen carbonate|L-glutamate|N-acetyl-L-glutamate|coenzyme A|L-arginine|phosphate|N-acetyl-L-ornithine|carbamoyl phosphate|diphosphate|L-aspartate|L-citrulline|H+|2-oxoglutarate
|
160
|
|
partial TCA cycle (obligate autotrophs)
|
PWY-5913
|
|
fumarate|NADPH|hydrogen carbonate|ammonium|H2O|NAD+|acetyl-CoA|NADP+|oxaloacetate|L-glutamate|D-threo-isocitrate|phosphate|CO2|citrate|phosphoenolpyruvate|(S)-malate|succinate|coenzyme A|L-aspartate|H+|succinyl-CoA|cis-aconitate|2-oxoglutarate|NADH
|
159
|
|
glycolysis II (from fructose 6-phosphate)
|
PWY-5484
|
triosephosphate isomerase|phosphoglycerate kinase|glyceraldehyde 3-phosphate dehydrogenase|fructose 1,6-bisphosphatase II|pyruvate kinase I|alkaline phosphatase|6-phosphofructokinase II|6-phosphofructokinase I|fructose-1,6-bisphosphatase I|pyruvate kinase II|2,3-bisphosphoglycerate-dependent phosphoglycerate mutase|enolase|fructose-1,6-bisphosphatase|enolase, subunit of degradosome|pyridoxal phosphatase / fructose 1,6-bisphosphatase|NAD+-dependent glyceraldehyde-3-phosphate dehydrogenase|phosphoenolpyruvate synthetase|fructose bisphosphate aldolase class I|2,3-bisphosphoglycerate-independent phosphoglycerate mutase|fructose bisphosphate aldolase class II
|
H2O|NAD+|3-phospho-D-glycerate|β-D-fructofuranose 6-phosphate|2-phospho-D-glycerate|fructose 1,6-bisphosphate|phosphoenolpyruvate|glycerone phosphate|D-glyceraldehyde 3-phosphate|H+|phosphate|pyruvate|NADH|1,3-bisphospho-D-glycerate
|
157
|