pyrimidine deoxyribonucleotides de novo biosynthesis I
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PWY-7184
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dTMP kinase|apyrase|nucleoside triphosphate pyrophosphohydrolase|nucleoside diphosphate kinase|ribonucleoside diphosphate reductase 1|cancer-related nucleoside-triphosphatase|thymidylate kinase|dihydrofolate reductase/thymidylate synthase|ribonucleoside-diphosphate reductase|nucleoside-triphosphatase|ribonucleotide reductase|nucleoside-diphosphate kinase 1|B12-dependent ribonucleotide reductase|deoxyuridine triphosphatase|thymidylate synthase|pyrimidine deoxynucleoside triphosphate pyrophosphohydrolase
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H2O|diphosphate|H+|phosphate|a 5,10-methylene-tetrahydrofolate|a 7,8-dihydrofolate
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201
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pyrimidine deoxyribonucleotides de novo biosynthesis IV
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PWY-7198
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dCTP deaminase (dUMP-forming)|thymidylate synthase|dCTP deaminase (dUMP-forming) [Dcd]6
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H2O|diphosphate|H+|phosphate|ammonium|a 5,10-methylene-tetrahydrofolate|a 7,8-dihydrofolate
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201
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ethylene biosynthesis V (engineered)
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PWY-7124
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fructose-1,6-bisphosphatase class 1|phosphoglycerate kinase|pentose-5-phosphate 3-epimerase|Yeast Adrenodoxin Homolog|glyceraldehyde 3-phosphate dehydrogenase 2|phosphoribulokinase|ribulose bisphosphate carboxylase/oxygenase|triosephosphate isomerase|enolase|D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase|2-oxoglutarate-dependent ethylene/succinate-forming enzyme|NADP-dependent isocitrate dehydrogenase|D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase [Slr2094]4|ferredoxin-NADP oxidoreductase|transketolase|ribose 5-phosphate isomerase|2-oxoglutarate-dependent ethylene/succinate-forming enzyme efe|phosphoglycerate mutase|aconitase|fructose-bisphosphate aldolase / sedoheptulose-1,7-bisphosphate aldolase|photosystem I|ferredoxin oxidoreductase|citrate synthase
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D-xylulose 5-phosphate|NADPH|hydrogen carbonate|D-sedoheptulose-1,7-bisphosphate|hν|D-sedoheptulose 7-phosphate|D-ribulose 5-phosphate|H2O|acetyl-CoA|β-D-fructofuranose 6-phosphate|NADP+|oxaloacetate|D-threo-isocitrate|D-glyceraldehyde 3-phosphate|phosphate|1,3-bisphospho-D-glycerate|CO2|ethene|D-erythrose 4-phosphate|citrate|phosphoenolpyruvate|oxygen|coenzyme A|3-phospho-D-glycerate|2-phospho-D-glycerate|fructose 1,6-bisphosphate|glycerone phosphate|D-ribulose-1,5-bisphosphate|H+|cis-aconitate|2-oxoglutarate
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199
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8-amino-7-oxononanoate biosynthesis I
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PWY-6519
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enoyl-[acyl-carrier-protein] reductase [FabI]4|3-hydroxy-acyl-[acyl-carrier-protein] dehydratase [FabZ]6|KASI [FabB]2|3-oxoacyl-[acyl-carrier-protein] reductase|3-oxoacyl-[acyl-carrier-protein] reductase [FabG]4|8-amino-7-oxononanoate synthase|KASI|malonyl-[acp] methyltransferase bioC|pimeloyl-[acyl-carrier protein] methyl ester esterase|pimeloyl-[acp] methyl ester esterase|3-hydroxy-acyl-[acyl-carrier-protein] dehydratase|malonyl-[acp] methyltransferase|enoyl-[acyl-carrier-protein] reductase
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S-adenosyl-L-methionine|H2O|8-amino-7-oxononanoate|NAD+|methanol|NADP+|L-alanine|CO2|S-adenosyl-L-homocysteine|H+|NADPH|NADH
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197
|
homolactic fermentation
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ANAEROFRUCAT-PWY
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alpha enolase|phosphoglycerate kinase|pyruvate kinase|glucose-6-phosphate isomerase|testis-specific glyceraldehyde-3-phosphate dehydrogenase|fructose-bisphosphate aldolase C|glyceraldehyde-3-phosphate dehydrogenase|fructose-bisphosphate aldolase A|phosphoglycerate kinase 2|fructose bisphosphate aldolase|triosephosphate isomerase|beta enolase|pyruvate kinase M1/M2|phosphoglycerate mutase 1|enolase|hexokinase-2|6-phosphofructokinase type C|6-phosphofructokinase, liver type|lactate dehydrogenase / imidazole-lactate dehydrogenase|fructose-bisphosphate aldolase B|phosphoglycerate kinase 1|glucokinase|6-phosphofructokinase, muscle type|6-phosphofructokinase|hexokinase-1|gamma enolase|hexokinase-3|bisphosphoglycerate mutase|phosphoglycerate mutase 2|L-lactate dehydrogenase|pyruvate kinase R/L
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H2O|NAD+|3-phospho-D-glycerate|D-glucopyranose 6-phosphate|2-phospho-D-glycerate|fructose 1,6-bisphosphate|phosphoenolpyruvate|glycerone phosphate|β-D-fructofuranose 6-phosphate|D-glyceraldehyde 3-phosphate|H+|phosphate|1,3-bisphospho-D-glycerate|pyruvate|NADH|(S)-lactate
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196
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superpathway of hexitol degradation (bacteria)
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HEXITOLDEGSUPER-PWY
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phosphoglycerate kinase|glyceraldehyde 3-phosphate dehydrogenase|pyruvate kinase I|L-galactitol-1-phosphate 5-dehydrogenase [GatD]2|fructose bisphosphate aldolase class I|2,3-bisphosphoglycerate-dependent phosphoglycerate mutase|6-phosphofructokinase I|fructose bisphosphate aldolase class II|pyridoxal phosphatase / fructose 1,6-bisphosphatase|triosephosphate isomerase|L-galactitol-1-phosphate 5-dehydrogenase|fructose 1,6-bisphosphatase II|fructose-1,6-bisphosphatase I|mannitol-1-phosphate 5-dehydrogenase|enolase, subunit of degradosome|phosphoenolpyruvate synthetase|tagatose-1,6-bisphosphate aldolase 2|sorbitol-6-phosphate dehydrogenase|6-phosphofructokinase II|alkaline phosphatase|pyruvate kinase II|fructose-1,6-bisphosphatase|tagatose-1,6-bisphosphate aldolase 1|2,3-bisphosphoglycerate-independent phosphoglycerate mutase
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galactitol 1-phosphate|D-tagatofuranose 1,6-bisphosphate|H2O|D-tagatofuranose 6-phosphate|NAD+|D-mannitol 1-phosphate|D-sorbitol 6-phosphate|β-D-fructofuranose 6-phosphate|2-phospho-D-glycerate|fructose 1,6-bisphosphate|phosphoenolpyruvate|glycerone phosphate|3-phospho-D-glycerate|D-glyceraldehyde 3-phosphate|H+|keto-L-tagatose 6-phosphate|phosphate|D-fructose 6-phosphate|pyruvate|NADH|1,3-bisphospho-D-glycerate
|
195
|
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
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alpha enolase|pyruvate kinase|glucose-6-phosphate isomerase|testis-specific glyceraldehyde-3-phosphate dehydrogenase|fructose-bisphosphate aldolase C|glyceraldehyde-3-phosphate dehydrogenase|fructose-bisphosphate aldolase A|phosphoglycerate kinase 2|triosephosphate isomerase|beta enolase|pyruvate kinase M1/M2|phosphoglycerate mutase 1|enolase|hexokinase-2|6-phosphofructokinase type C|6-phosphofructokinase, liver type|fructose-bisphosphate aldolase B|phosphofructokinase|phosphoglycerate kinase 1|glucokinase|bisphosphoglycerate mutase|6-phosphofructokinase, muscle type|fructose-bisphosphate aldolase|hexokinase-1|gamma enolase|hexokinase-3|2,3-bisphosphoglycerate-dependent phosphoglycerate mutase|phosphoglycerate mutase 2|phosphoglycerate kinase / triosephosphate isomerase|pyruvate kinase R/L
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H2O|NAD+|3-phospho-D-glycerate|D-glucopyranose 6-phosphate|2-phospho-D-glycerate|fructose 1,6-bisphosphate|phosphoenolpyruvate|glycerone phosphate|β-D-fructofuranose 6-phosphate|D-glyceraldehyde 3-phosphate|H+|phosphate|pyruvate|NADH|1,3-bisphospho-D-glycerate
|
192
|
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
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PWY-6282
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enoyl-[acyl-carrier-protein] reductase [FabI]4|3-hydroxy-acyl-[acyl-carrier-protein] dehydratase [FabZ]6|KASI [FabB]2|3-oxoacyl-[acyl-carrier-protein] reductase|3-oxoacyl-[acyl-carrier-protein] reductase [FabG]4|3-hydroxy-acyl-[acyl-carrier-protein] dehydratase|KASI|enoyl-[acyl-carrier-protein] reductase|multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1
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H2O|NAD+|palmitoleate|NADP+|CO2|H+|NADPH|NADH
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191
|
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
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dihydroxyacetone kinase|phosphoglycerate kinase|dihydroxyacetone synthase [DAS1]2|glyceraldehyde-3-phosphate dehydrogenase|transaldolase [TalB]2|dihydroxyacetone synthase
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D-ribulose 5-phosphate|D-xylulose 5-phosphate|H2O|NAD+|3-phospho-D-glycerate|β-D-fructofuranose 6-phosphate|dihydroxyacetone|formaldehyde|D-erythrose 4-phosphate|glycerone phosphate|D-sedoheptulose 7-phosphate|fructose 1,6-bisphosphate|D-glyceraldehyde 3-phosphate|H+|phosphate|NADH|1,3-bisphospho-D-glycerate
|
188
|
superpathway of aromatic amino acid biosynthesis
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COMPLETE-ARO-PWY
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anthranilate synthase component II|chorismate mutase / prephenate dehydrogenase|branched-chain amino-acid aminotransferase|tyrosine aminotransferase|shikimate kinase II|shikimate dehydrogenase / quinate dehydrogenase|chorismate synthase|3-dehydroquinate dehydratase|aspartate aminotransferase, PLP-dependent|indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase|anthranilate synthase|shikimate dehydrogenase / quinate dehydrogenase [YdiB]2|3-phosphoshikimate-1-carboxyvinyltransferase|3-dehydroquinate synthase|tryptophan synthase, α subunit|shikimate dehydrogenase|tryptophan synthase, β subunit dimer|chorismate mutase / prephenate dehydratase|2-dehydro-3-deoxyphosphoheptonate aldolase
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NADPH|L-glutamine|shikimate 3-phosphate|chorismate|H2O|NAD+|indole|NADP+|4-hydroxyphenylpyruvate|3-dehydroshikimate|L-glutamate|L-tryptophan|D-glyceraldehyde 3-phosphate|phosphate|5-phospho-α-D-ribose 1-diphosphate|pyruvate|CO2|L-phenylalanine|D-erythrose 4-phosphate|L-serine|L-tyrosine|shikimate|phosphoenolpyruvate|(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate|prephenate|1-(o-carboxyphenylamino)-1-deoxyribulose 5-phosphate|5-enolpyruvoyl-shikimate 3-phosphate|3-deoxy-D-arabino-heptulosonate 7-phosphate|anthranilate|diphosphate|2-oxo-3-phenylpropanoate|3-dehydroquinate|H+|2-oxoglutarate|NADH
|
187
|