superpathway of purines degradation in plants
|
P165-PWY
|
guanosine deaminase|ureidoglycolate urea-lyase|purine nucleosidase|allantoicase|xanthine dehydrogenase|allantoinase|IMP dehydrogenase|AMP deaminase|factor-independent urate hydroxylase|guanine deaminase|hydroxyisourate hydrolase|ribonucleoside hydrolase|S-allantoin synthase
|
allantoate|inosine|D-ribofuranose|ammonium|5-hydroxyisourate|H2O|NAD+|hypoxanthine|glyoxylate|xanthosine|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline|phosphate|S-ureidoglycolate|CO2|urea|urate|guanosine|guanine|hydrogen peroxide|(S)-(+)-allantoin|oxygen|H+|xanthine|NADH
|
26
|
6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
|
PWY-7539
|
GTP cyclohydrolase II|dihydroneopterin aldolase|phosphoribosylanthranilate isomerase [multifunctional]|folate synthesis bifunctional protein
|
H2O|glycolaldehyde|diphosphate|7,8-dihydroneopterin 3-phosphate|(7,8-dihydropterin-6-yl)methyl diphosphate|7,8-dihydroneopterin|H+|phosphate|formate|6-(hydroxymethyl)-7,8-dihydropterin
|
25
|
sitosterol degradation to androstenedione
|
PWY-6948
|
sitosterol dehydrogenase|3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA carboxylase|steroid 3-ketoacyl-CoA thiolase [FadA5]2|3-oxochol-4-en-24-oyl-CoA dehydrogenase [ChsE3]2
|
3-oxo-4-pregnene-20-carboxyl-CoA|22-hydroxy-3-oxochol-4-en-24-oyl-CoA|3,24-dioxo-cholest-4-en-26-oate|3-oxo-24-ethyl-26-al-cholest-4-ene|3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA|3,24-dioxocholest-4-en-26-oyl-CoA|H2O|NAD+|acetyl-CoA|hydrogen carbonate|17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA|3-oxochol-4,22-dien-24-oyl-CoA|3-oxo-24-ethyl-cholest-4-en-26-oate|3-oxo-24-ethyl-cholest-4-ene|phosphate|3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA|3,22-dioxochol-4-en-24-oyl-CoA|3-oxo-24-ethyl-26-hydroxy-cholest-4-ene|propanoyl-CoA|androst-4-ene-3,17-dione|3-oxochol-4-en-24-oyl-CoA|oxygen|coenzyme A|3-oxo-4,17-pregnadiene-20-carboxyl-CoA|diphosphate|3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA|sitosterol|H+|3-oxo-24-ethyl-cholest-5-ene|NADH
|
25
|
allantoin degradation IV (anaerobic)
|
PWY0-41
|
allantoinase|S-ureidoglycine aminohydrolase|allantoate amidohydrolase|oxamate carbamoyltransferase|ureidoglycolate dehydrogenase
|
oxalurate|allantoate|H2O|NAD+|carbamoyl phosphate|ammonium|CO2|(S)-(+)-allantoin|H+|phosphate|oxamate|S-ureidoglycolate|NADH|S-ureidoglycine
|
25
|
methylgallate degradation
|
METHYLGALLATE-DEGRADATION-PWY
|
2-pyrone-4,6-dicarboxylate hydrolase|3-O-methylgallate 3,4-dioxygenase|protocatechuate 4,5-dioxygenase|4-oxalomesaconate hydratase|4-carboxy-2-hydroxymuconate hydratase|4-oxalomesaconate tautomerase galD|oxaloacetate β-decarboxylase / 4-oxalocitramalate aldolase|HMG aldolase
|
H2O|methanol|2-hydroxy-4-oxobutane-1,2,4-tricarboxylate|(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate|(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate|oxaloacetate|H+|2-pyrone-4,6-dicarboxylate|3-O-methylgallate|pyruvate|CO2|oxygen
|
25
|
syringate degradation
|
PWY-6339
|
4-oxalmesaconate hydratase|gallate dioxygenase|oxaloacetate β-decarboxylase / 4-oxalocitramalate aldolase|3-O-methylgallate 3,4-dioxygenase|syringate O-demethylase desA|4-oxalomesaconate hydratase|vanillate/3-O-methylgallate O-demethylase|syringate O-demethylase|protocatechuate 4,5-dioxygenase|4-oxalomesaconate tautomerase galD|4-oxalomesaconate tautomerase|vanillate/3-O-methylgallate O-demethylase ligM|2-pyrone-4,6-dicarboxylate hydrolase
|
H2O|4-carboxy-2-hydroxy-6-methoxy-6-oxohexa-2,4-dienoate|methanol|2-hydroxy-4-oxobutane-1,2,4-tricarboxylate|gallate|a tetrahydrofolate|(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate|an N5-methyl-tetrahydrofolate|(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate|(1Z,3Z)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate|oxaloacetate|H+|2-pyrone-4,6-dicarboxylate|syringate|3-O-methylgallate|pyruvate|CO2|oxygen
|
25
|
L-rhamnose degradation I
|
RHAMCAT-PWY
|
bifunctional L-rahmnulose-phosphate aldolase/L-lactaldehyde dehydrogenase|rhamnose / lyxose:H+ symporter rhaT|bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase|L-rhamnose isomerase|L-rhamnulose kinase|L-rhamnose mutarotase|rhamnulose-1-phosphate aldolase|L-rhamnose isomerase [RhaA]4|rhamnulokinase
|
β-L-rhamnopyranose|(S)-lactaldehyde|H+|glycerone phosphate|α-L-rhamnopyranose|keto-L-rhamnulose|L-rhamnulofuranose|L-rhamnulose 1-phosphate
|
24
|
L-methionine salvage cycle I (bacteria and plants)
|
PWY-7528
|
spermidine synthase|methionine-oxo-acid transaminase|acireductone dioxygenase [iron(II)-requiring]|MTA nucleosidase|S-adenosylmethionine synthetase|methylthioribulose-1-phosphate dehydratase|MTR kinase|2-oxo-4-methylthiobutanoate-glutamine aminotransferase|2-oxoglutaramate amidase|2,3-diketo-5-methylthiopentyl-1-phosphate enolase|adenosylmethionine decarboxylase|5-methylthioribose-1-phosphate isomerase|acireductone synthase [multifunctional]|2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase|acireductone dioxygenase
|
S-adenosyl-L-methionine|S-methyl-5-thio-D-ribose|L-glutamine|spermidine|ammonium|L-methionine|H2O|putrescine|2-oxo-4-methylthiobutanoate|formate|CO2|2-hydroxy-5-(methylthio)-3-oxopent-1-enyl 1-phosphate|5-(methylthio)-2,3-dioxopentyl 1-phosphate|phosphate|oxygen|1,2-dihydroxy-5-(methylthio)pent-1-en-3-one|S-methyl-5-thio-α-D-ribose 1-phosphate|adenine|diphosphate|5-methylthioribulose 1-phosphate|2-oxoglutaramate|S-methyl-5-thioadenosine|H+|2-oxoglutarate
|
24
|
L-methionine salvage cycle III
|
PWY-7527
|
kynurenine aminotransferase I|methionine adenosyltransferase|methylthioribose-1-phosphate isomerase|S-adenosylmethionine decarboxylase|spermidine synthase|ω-amidase NIT2
|
S-adenosyl-L-methionine|L-glutamine|spermidine|ammonium|L-methionine|H2O|putrescine|2-oxo-4-methylthiobutanoate|1,2-dihydroxy-5-(methylthio)pent-1-en-3-one|CO2|2-hydroxy-5-(methylthio)-3-oxopent-1-enyl 1-phosphate|5-(methylthio)-2,3-dioxopentyl 1-phosphate|phosphate|oxygen|formate|S-methyl-5-thio-α-D-ribose 1-phosphate|adenine|diphosphate|5-methylthioribulose 1-phosphate|2-oxoglutaramate|S-methyl-5-thioadenosine|H+|2-oxoglutarate
|
24
|
L-methionine salvage cycle II (plants)
|
PWY-7270
|
acireductone dioxygenase [iron(II)-requiring]|methionine adenosyltransferase|dehydratase-enolase-phosphatase|methionine-oxo-acid transaminase|MTA nucleosidase|1-aminocyclopropane-1-carboxylate synthase|MTR kinase|2-oxo-4-methylthiobutanoate-glutamine aminotransferase|2-oxoglutaramate amidase|5-methylthioribose-1-phosphate isomerase
|
S-adenosyl-L-methionine|S-methyl-5-thio-D-ribose|L-glutamine|ammonium|L-methionine|H2O|2-oxo-4-methylthiobutanoate|1,2-dihydroxy-5-(methylthio)pent-1-en-3-one|2-hydroxy-5-(methylthio)-3-oxopent-1-enyl 1-phosphate|5-(methylthio)-2,3-dioxopentyl 1-phosphate|phosphate|oxygen|formate|S-methyl-5-thio-α-D-ribose 1-phosphate|adenine|diphosphate|5-methylthioribulose 1-phosphate|2-oxoglutaramate|S-methyl-5-thioadenosine|H+|1-aminocyclopropane-1-carboxylate|2-oxoglutarate
|
24
|