|
L-tryptophan degradation IX
|
PWY-5655
|
3-hydroxyanthranilate 3,4-dioxygenase|aminocarboxymuconate-semialdehyde decarboxylase|2-aminomuconate deaminase|2-aminomuconate semialdehyde dehydrogenase
|
NADPH|ammonium|H2O|N-formylkynurenine|3-hydroxyanthranilate|acetyl-CoA|NADP+|L-alanine|acetaldehyde|L-tryptophan|(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate|formate|pyruvate|CO2|H+|(2Z,4E)-2-aminomuconate|NAD+|oxygen|coenzyme A|2-oxopent-4-enoate|3-hydroxy-L-kynurenine|4-hydroxy-2-oxopentanoate|aminocarboxymuconate semialdehyde|L-kynurenine|(3E)-2-oxohex-3-enedioate|NADH
|
33
|
|
ureide biosynthesis
|
URSIN-PWY
|
hydroxyisourate hydrolase|xanthine dehydrogenase|factor-independent urate hydroxylase|purine nucleoside phosphorylase|IMP dehydrogenase
|
H2O|NAD+|hydrogen peroxide|urate|CO2|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline|α-D-ribose-1-phosphate|xanthosine|5-hydroxyisourate|(S)-(+)-allantoin|H+|phosphate|xanthine|NADH|oxygen
|
32
|
|
L-ornithine biosynthesis II
|
ARGININE-SYN4-PWY
|
ornithine aminotransferase|glutamate dehydrogenase 2|δ-1-pyrroline-5-carboxylate synthase|glutamate dehydrogenase 1
|
H2O|γ-L-glutamyl 5-phosphate|NADPH|H+|NADP+|L-glutamate-5-semialdehyde|L-ornithine|L-glutamate|phosphate|ammonium|2-oxoglutarate
|
32
|
|
toluene degradation IV (aerobic) (via catechol)
|
PWY-5178
|
2-hydroxymuconic semialdehyde hydrolase|2-hydroxymuconic semialdehyde hydrolase xylF|benzyl alcohol dehydrogenase|xylene monooxygenase|catechol 2,3-dioxygenase|benzoate 1,2-dioxygenase|benzyl alcohol dehydrogenase [XylB]2|4-hydroxy-2-ketovalerate aldolase|2-hydroxymuconate semialdehyde dehydrogenase|benzaldehyde dehydrogenase [multifunctional]|toluene monooxygenase / 4-nitrotoluene monooxygenase|4-oxalocrotonate decarboxylase, subunit of 4-oxalocrotonate/2-oxopent-4-enoate hydratase complex|2-hydroxymuconate tautomerase|1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase [multifunctional]|4-hydroxybenzaldehyde dehydrogenase|2-oxopent-4-enoate hydratase, subunit of 4-oxalocrotonate/2-oxopent-4-enoate hydratase complex|benzaldehyde dehydrogenase
|
4-hydroxy-2-oxopentanoate|(2Z,4E)-2-hydroxyhexa-2,4-dienedioate|H2O|benzaldehyde|NAD+|acetyl-CoA|acetaldehyde|3,5-cyclohexadiene-1,2-diol-1-carboxylate|(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate|formate|pyruvate|CO2|benzyl alcohol|benzoate|oxygen|coenzyme A|2-oxopent-4-enoate|H+|toluene|(3E)-2-oxohex-3-enedioate|catechol|NADH
|
32
|
|
3-hydroxypropanoate cycle
|
PWY-5743
|
methylmalonyl-CoA mutase|acetyl-CoA carboxylase complex|succinyl CoA:L-malate CoA transferase [(SmtB)(SmtA)]6|succinyl CoA:L-malate CoA transferase|propionyl-CoA carboxylase|malonyl CoA reductase|propionyl-CoA synthase|methylmalonyl-CoA epimerase|L-malyl CoA lyase
|
(S)-methylmalonyl-CoA|NADPH|hydrogen carbonate|H2O|acetyl-CoA|3-hydroxypropanoyl-CoA|3-oxopropanoate|NADP+|glyoxylate|propanoyl-CoA|phosphate|(S)-malyl-CoA|(S)-malate|malonyl-CoA|succinate|coenzyme A|(R)-methylmalonyl-CoA|diphosphate|acryloyl-CoA|H+|succinyl-CoA|3-hydroxypropanoate
|
32
|
|
superpathway of the 3-hydroxypropanoate cycle
|
PWY-7024
|
methylmalonyl-CoA mutase|β-methylmalyl-CoA dehydratase|acetyl-CoA carboxylase complex|propionyl-CoA synthase|succinyl CoA:L-malate CoA transferase [(SmtB)(SmtA)]6|succinyl CoA:L-malate CoA transferase|mesaconyl-C1-CoA-C4-CoA transferase|propionyl-CoA carboxylase|mesaconyl-C4-CoA hydratase|mesaconyl-C1-CoA-C4-CoA transferase [Mct]2|malonyl CoA reductase|mesaconyl-C4-CoA hydratase [Meh]2|methylmalonyl-CoA epimerase|L-malyl CoA lyase
|
(S)-methylmalonyl-CoA|NADPH|2-methylfumaryl-CoA|hydrogen carbonate|H2O|acetyl-CoA|3-hydroxypropanoyl-CoA|propanoyl-CoA|NADP+|glyoxylate|phosphate|pyruvate|3-oxopropanoate|3-methylfumaryl-CoA|(S)-malyl-CoA|(S)-malate|malonyl-CoA|succinate|(2R,3S)-β-methylmalyl-CoA|coenzyme A|(R)-methylmalonyl-CoA|diphosphate|acryloyl-CoA|(3S)-citramalyl-CoA|H+|succinyl-CoA|3-hydroxypropanoate
|
32
|
|
myo-inositol degradation I
|
P562-PWY
|
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase|5-dehydro-2-deoxy-D-gluconate kinase|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase iolD|(methyl)malonate-semialdehyde dehydrogenase|inositol dehydrogenase|5-dehydro-2-deoxygluconokinase|myo-inositol 2-dehydrogenase|scyllo-inosose dehydratase|myo-inosose-2 dehydratase|malonate-semialdehyde dehydrogenase|5-deoxy-D-glucuronate isomerase iolB|5-dehydro-2-deoxyphosphogluconate aldolase|5-deoxy-D-glucuronate isomerase|2-deoxy-5-keto-D-gluconate 6-phosphate aldolase
|
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione|H2O|NAD+|acetyl-CoA|scyllo-inosose|2-deoxy-5-dehydro-D-gluconate|myo-inositol|CO2|H+|5-dehydro-2-deoxy-D-gluconate 6-phosphate|5-deoxy-D-glucuronate|glycerone phosphate|3-oxopropanoate|NADH|coenzyme A
|
31
|
|
superpathway of lipopolysaccharide biosynthesis
|
LPSSYN-PWY
|
lipopolysaccharide core heptosyltransferase III|UDP-3-O-acyl-N-acetylglucosamine deacetylase|D-arabinose 5-phosphate isomerase|ADP-heptose:LPS heptosyltransferase II|UDP-D-glucose:(glucosyl)LPS α-1,3-glucosyltransferase waaO|UDP-D-glucose:(glucosyl)LPS α-1,3-glucosyltransferase|UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase|lipopolysaccharide core heptose (II) kinase waaY|lipopolysaccharide core heptose (I) kinase waaP|ADP-heptose:LPS heptosyltransferase I waaC|KDO transferase|myristoyl-acyl carrier protein (ACP)-dependent acyltransferase lpxM|UDP-N-acetylglucosamine acyltransferase|UDP-2,3-diacylglucosamine hydrolase|UDP-2,3-diacylglucosamine hydrolase lpxH|ADP-heptose:LPS heptosyltransferase I|lipopolysaccharide core biosynthesis; heptosyl transferase IV; probably hexose transferase|lipopolysaccharide core biosynthesis; heptosyl transferase IV; probably hexose transferase waaU|UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase [LpxD]3|lauroyl acyltransferase|lipopolysaccharide glucosyltransferase I|lipopolysaccharide core heptose (II) kinase|3-deoxy-D-manno-octulosonate 8-phosphate synthase|lauroyl acyltransferase lpxL|UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase|3-deoxy-D-manno-octulosonate 8-phosphate phosphatase [KdsC]4|lipopolysaccharide ABC transporter [MsbA]2|UDP-glucose:(glucosyl)LPS α-1,2-glucosyltransferase|lipopolysaccharide glucosyltransferase I waaG|UDP-glucose:(glucosyl)LPS α-1,2-glucosyltransferase waaJ|UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase waaB|UDP-N-acetylglucosamine acyltransferase [LpxA]3|ADP-heptose:LPS heptosyltransferase II waaF|myristoyl-acyl carrier protein (ACP)-dependent acyltransferase|lipopolysaccharide core heptose (I) kinase|lipid A disaccharide synthase|UDP-3-O-acyl-N-acetylglucosamine deacetylase lpxC|3-deoxy-D-manno-octulosonate cytidylyltransferase|lipopolysaccharide core heptosyltransferase III waaQ|lipid A disaccharide synthase [LpxB]8
|
UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine|3-deoxy-α-D-manno-octulosonate|UDP-2-N,3-O-bis(3R)-3-hydroxytetradecanoyl-α-D-glucosamine|galactosyl-(glucosyl)3-(heptosyl)3-Kdo2-lipid A-bisphosphate|glucosyl-(heptosyl)2-Kdo2-lipid A|UDP-3-O-(3R)-3-hydroxymyristoyl-N-acetyl-α-D-glucosamine|UDP-N-acetyl-α-D-glucosamine|D-arabinofuranose 5-phosphate|D-ribulose 5-phosphate|lipid IVA|H2O|α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA|glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate|phosphate|galactosyl-glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate|3-deoxy-D-manno-octulosonate 8-phosphate|acetate|CMP-3-deoxy-β-D-manno-octulosonate|UDP-α-D-glucose|heptosyl-Kdo2-lipid A|phosphoenolpyruvate|α-Kdo-(2→6)-lipid IVA|2,3-bis(3R)-3-hydroxymyristoyl-α-D-glucosaminyl 1-phosphate|α-Kdo-(2->4)-α-Kdo-(2->6)-(lauroyl)-lipid IVA|lipid A-core|aldehydo-D-arabinose 5-phosphate|(heptosyl)2-Kdo2-lipid A|glucosyl-(heptosyl)2-Kdo2-lipid A-phosphate|glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate|diphosphate|ADP-L-glycero-β-D-manno-heptose|galactosyl-(glucosyl)2-(heptosyl)3-Kdo2-lipid A-bisphosphate|H+|α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A|UDP-α-D-galactose
|
31
|
|
diacylglycerol and triacylglycerol biosynthesis
|
TRIGLSYN-PWY
|
glycerol-3-phosphate O-acyltransferase|1-acyl-sn-gylcerol-3-phosphate acyl transferase|lysophosphatidate acyltransferase|phosphatidate phosphatase|diacylglycerol pyrophosphate phosphatase 1|diacylglycerol kinase|diacylglycerol diphosphate phosphatase / phosphatidate phosphatase|acyl-CoA:diacylglycerol acyltransferase|diacylglycerol kinase DGK1|phospholipid:diacylglycerol acyltransferase|glycerol-3-phosphate 1-O-acyltransferase|lipid phosphatidate phosphatase|cytoplasmic glycerol-3-phosphate acyltransferase|diacylglycerol transacylase|lyso-phosphatidylcholine acyltransferase|glycerol-3-phosphate acyltransferase
|
H2O|a 1,2-diacyl-sn-glycerol|a 1-acyl-sn-glycerol 3-phosphate|a triacyl-sn-glycerol|H+|sn-glycerol 3-phosphate|phosphate|a 2-monoglyceride|coenzyme A
|
31
|
|
superpathway of C1 compounds oxidation to CO2
|
PWY-1882
|
methylene tetrahydromethanopterin dehydrogenase|S-formylglutathione hydrolase|methylamine dehydrogenase|methanol dehydrogenase (cytochrome c)|NADP-dependent methylene tetrahydromethanopterin dehydrogenase [multifunctional]|S-(hydroxymethyl)glutathione synthase [Gfa]|formaldehyde-activating enzyme [Fae]5|NAD- and glutathione-dependent formaldehyde dehydrogenase|S-(hydroxymethyl)glutathione synthase|formyltransferase/hydrolase complex|NAD-dependent formate dehydrogenase|formaldehyde-activating enzyme|methenyltetrahydropterin cyclohydrolase|cytochrome c-dependent methanol dehydrogenase
|
5-formyl-tetrahydromethanopterin|H2O|NAD+|tetrahydromethanopterin|methanol|methane|formaldehyde|glutathione|CO2|S-hydroxymethylglutathione|5,10-methenyltetrahydromethanopterin|H+|S-formylglutathione|ammonium|5,10-methylene-tetrahydromethanopterin|formate|methylamine|NADH|oxygen
|
30
|