|
putrescine biosynthesis IV
|
PWY-6305
|
arginine decarboxylase|arginase|ornithine decarboxylase
|
H2O|putrescine|urea|L-ornithine|L-arginine|H+|agmatine|CO2
|
41
|
|
phosphopantothenate biosynthesis I
|
PANTO-PWY
|
pantothenate synthetase|2-dehydropantoate 2-reductase|pantothenate kinase|acetohydroxy acid isomeroreductase|pantothenate kinase 1|pantoate:β-alanine ligase|3-methyl-2-oxobutanoate hydroxymethyltransferase|pantoate β-alanine ligase|ketopantoate hydroxymethyltransferase
|
3-methyl-2-oxobutanoate|H2O|NADPH|2-dehydropantoate|diphosphate|(R)-4-phosphopantothenate|NADP+|(R)-pantothenate|(R)-pantoate|H+|a 5,10-methylene-tetrahydrofolate|a tetrahydrofolate|β-alanine
|
40
|
|
ethylmalonyl-CoA pathway
|
PWY-5741
|
(2S)-methylsuccinyl-CoA dehydrogenase|β-methylmalyl-CoA lyase / malyl-CoA lyase|(2R)-ethylmalonyl-CoA mutase [Ecm]2|malate thiokinase [MtkB][MtkA]|crotonyl-CoA carboxylase/reductase [Ccr]2|crotonyl-CoA carboxylase/reductase|ethylmalonyl-CoA/methylmalonyl-CoA epimerase epi|malate thiokinase|(R)-3-hydroxybutyryl-CoA dehydrogenase|(2S)-methylsuccinyl-CoA dehydrogenase [Mcd]2|acetyl-CoA acetyltransferase|ethylmalonyl-CoA/methylmalonyl-CoA epimerase|(2R)-ethylmalonyl-CoA mutase|mesaconyl-CoA hydratase|malyl coenzyme A lyase
|
H2O|NADPH|acetoacetyl-CoA|acetyl-CoA|(2S)-methylsuccinyl-CoA|propanoyl-CoA|(2R,3S)-β-methylmalyl-CoA|(S)-malate|NADP+|glyoxylate|(2R)-ethylmalonyl-CoA|(3R)-3-hydroxybutanoyl-CoA|2-methylfumaryl-CoA|(S)-malyl-CoA|H+|phosphate|(2S)-ethylmalonyl-CoA|CO2|crotonyl-CoA|coenzyme A
|
40
|
|
formaldehyde assimilation I (serine pathway)
|
PWY-1622
|
malate thiokinase [MtkB][MtkA]|phosphoenolpyruvate carboxylase|glycerate 2-kinase|malate thiokinase|2,3-bisphosphoglycerate-dependent phosphoglycerate mutase|hydroxypyruvate reductase Me|enolase|malate dehydrogenase (NAD-linked)|serine hydroxymethyltransferase|hydroxypyruvate reductase|serine-glyoxylate aminotransferase|malyl coenzyme A lyase
|
glycine|a 5,10-methylene-tetrahydrofolate|hydroxypyruvate|H2O|NAD+|acetyl-CoA|hydrogen carbonate|glyoxylate|oxaloacetate|phosphate|L-serine|a tetrahydrofolate|phosphoenolpyruvate|(S)-malyl-CoA|(S)-malate|D-glycerate|coenzyme A|3-phospho-D-glycerate|2-phospho-D-glycerate|formaldehyde|H+|NADH
|
40
|
|
nitrate reduction V (assimilatory)
|
PWY-5675
|
glutamate dehydrogenase (NADP+)|assimilatory nitrite reductase [Nit-6]2|glutamine synthetase, type II (tetramer), subunit of glutamine synthetase, type II (octamer)|glutamine synthetase, type II (octamer)|assimilatory nitrate reductase (NADPH)|assimilatory nitrite reductase
|
H2O|NADPH|nitrate|L-glutamine|NADP+|nitrite|ammonium|L-glutamate|H+|phosphate|2-oxoglutarate
|
40
|
|
methylerythritol phosphate pathway II
|
PWY-7560
|
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase|2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplast|1-deoxy-D-xylulose 5-phosphate synthase|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase GcpE|1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose-5-phosphate synthase|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase
|
1-deoxy-D-xylulose 5-phosphate|H2O|NADPH|dimethylallyl diphosphate|(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate|diphosphate|D-glyceraldehyde 3-phosphate|NADP+|isopentenyl diphosphate|2-C-methyl-D-erythritol-2,4-cyclodiphosphate|2-phospho-4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol|H+|4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol|pyruvate|CO2|2-C-methyl-D-erythritol 4-phosphate
|
39
|
|
sucrose degradation III (sucrose invertase)
|
PWY-621
|
hexokinase|sucrose invertase|cytosolic glucose-6-phosphate isomerase|fructokinase / hexokinase|glucokinase|sucrose β-fructofuranosidase / amylosucrase|plastidic phosphoglucose isomerase|neutral/alkaline invertase|glucose-6-phosphate isomerase
|
H2O|sucrose|β-D-fructofuranose|H+|β-D-fructofuranose 6-phosphate|D-glucopyranose 6-phosphate
|
39
|
|
superpathway of glycerol degradation to 1,3-propanediol
|
GOLPDLCAT-PWY
|
dihydroxyacetone kinase|glycerol dehydratase|glycerol channel GlpF [GlpF]4|1,3-propanediol dehydrogenase|glycerol dehydrogenase
|
3-hydroxypropionaldehyde|H2O|1,3-propanediol|dihydroxyacetone|glycerone phosphate|H+|NAD+|glycerol|NADH
|
39
|
|
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
|
PWY-7159
|
magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1|aerobic magnesium-protoporphyrin IX monomethyl ester cyclase|light-independent protochlorophyllide reductase|protoporphyrinogen oxidase|magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2
|
coproporphyrinogen III|S-adenosyl-L-methionine|H2O|Mg2+|NADPH|Mg-protoporphyrin|protoporphyrinogen IX|uroporphyrinogen-III|3,8-divinyl protochlorophyllide a|NADP+|3,8-divinyl chlorophyllide a|S-adenosyl-L-homocysteine|131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester|131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester|hydrogen peroxide|H+|magnesium-protoporphyrin IX 13-monomethyl ester|phosphate|protoporphyrin IX|CO2|oxygen
|
39
|
|
Entner-Doudoroff pathway II (non-phosphorylative)
|
NPGLUCAT-PWY
|
pyruvate kinase|glycerate 2-kinase|aldose 1-dehydrogenase|D-glyceraldehyde dehydrogenase|2-keto-3-deoxy-6-phosphogluconate aldolase|2-dehydro-3-deoxy-D-arabinonate aldolase [multifunctional]|galactonate dehydratase / gluconate dehydratase|D-glyceraldehyde dehydrogenase [aldehyde dehydrogenase γ subunit][aldehyde dehydrogenase β subunit][aldehyde dehydrogenase αe subunit]|gluconate dehydratase|glucose dehydrogenase
|
D-gluconate|D-glyceraldehyde|H2O|NADPH|acetyl-CoA|2-phospho-D-glycerate|NADP+|phosphoenolpyruvate|2-dehydro-3-deoxy-D-gluconate|H+|D-glycerate|pyruvate|CO2|D-glucono-1,5-lactone|coenzyme A
|
39
|