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superpathway of pyridoxal 5'-phosphate biosynthesis and salvage
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PWY0-845
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erythronate-4-phosphate dehydrogenase|erythrose 4-phosphate dehydrogenase|erythronate-4-phosphate dehydrogenase [PdxB]2|4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent|4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent [PdxA]2|pyridoxal kinase I / hydroxymethylpyrimidine kinase|3-phosphoserine aminotransferase [multifunctional]|erythrose 4-phosphate dehydrogenase [Epd]4|1-deoxyxylulose-5-phosphate synthase|pyridoxal kinase 2
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pyridoxamine 5-phosphate|1-deoxy-D-xylulose 5-phosphate|ammonium|pyridoxal 5-phosphate|3-amino-1-hydroxyacetone 1-phosphate|H2O|NAD+|pyridoxine|L-glutamate|D-glyceraldehyde 3-phosphate|(2S)-2-amino-3-oxo-4-phosphonooxybutanoate|phosphate|4-phospho-hydroxy-L-threonine|pyruvate|CO2|D-erythrose 4-phosphate|hydrogen peroxide|4-phospho-D-erythronate|oxygen|pyridoxamine|pyridoxine 5-phosphate|pyridoxal|H+|(3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate|2-oxoglutarate|NADH
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50
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pyridoxal 5'-phosphate biosynthesis I
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PYRIDOXSYN-PWY
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erythronate-4-phosphate dehydrogenase|erythrose 4-phosphate dehydrogenase|erythronate-4-phosphate dehydrogenase [PdxB]2|4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent|4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent [PdxA]2|3-phosphoserine aminotransferase [multifunctional]|erythrose 4-phosphate dehydrogenase [Epd]4|1-deoxyxylulose-5-phosphate synthase
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1-deoxy-D-xylulose 5-phosphate|H2O|4-phospho-hydroxy-L-threonine|NAD+|2-oxoglutarate|hydrogen peroxide|D-erythrose 4-phosphate|CO2|pyridoxal 5-phosphate|L-glutamate|pyridoxine 5-phosphate|(3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate|H+|(2S)-2-amino-3-oxo-4-phosphonooxybutanoate|phosphate|D-glyceraldehyde 3-phosphate|4-phospho-D-erythronate|pyruvate|NADH|oxygen|3-amino-1-hydroxyacetone 1-phosphate
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50
|
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glycogen biosynthesis I (from ADP-D-Glucose)
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GLYCOGENSYNTH-PWY
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glucose-1-phosphate adenylyltransferase|glycogen synthase|phosphoglucomutase|1,4-α-glucan branching enzyme glgB|1,4-α-glucan branching enzyme
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ADP-α-D-glucose|diphosphate|α-D-glucopyranose 1-phosphate|H+|D-glucopyranose 6-phosphate|a 1,4-α-D-glucan
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50
|
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glutaryl-CoA degradation
|
PWY-5177
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3-hydroxy-2-methylbutyryl-CoA dehydrogenase subunit|mitochondrial enoyl-CoA hydratase|glutaryl-CoA dehydrogenase|peroxisomal bifunctional enzyme|Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial|glutaryl-CoA dehydrogenase [GcdH]4|cytosolic acetyl-CoA acetyltransferase|acetyl-CoA C-acetyltransferase|mitochondrial acetyl-CoA acetyltransferase|enoyl-CoA hydratase
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glutaryl-CoA|(E)-glutaconyl-CoA|H2O|NAD+|acetyl-CoA|acetoacetyl-CoA|CO2|(S)-3-hydroxybutanoyl-CoA|H+|NADH|crotonyl-CoA|coenzyme A
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50
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superpathway of L-serine and glycine biosynthesis I
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SER-GLYSYN-PWY
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serine hydroxymethyltransferase 1|serine hydroxymethyltransferase 2|3-phosphoserine aminotransferase [multifunctional]|D-3-phosphoglycerate dehydrogenase|phosphoserine phosphatase|serine hydroxymethyltransferase|2-oxoglutarate reductase ((S)-2-hydroxyglutarate-forming) [multifunctional]|phosphoserine aminotransferase
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H2O|L-serine|NAD+|glycine|3-phospho-L-serine|3-phospho-D-glycerate|a tetrahydrofolate|3-phospho-hydroxypyruvate|L-glutamate|H+|phosphate|a 5,10-methylene-tetrahydrofolate|2-oxoglutarate|NADH
|
50
|
|
superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation
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GLCMANNANAUT-PWY
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glucosamine-6-phosphate deaminase|N-acetylmannosamine kinase|N-acetylneuraminate lyase|N-acetylglucosamine-6-phosphate deacetylase|N-acetylmannosamine-6-phosphate 2-epimerase [NanE]2|N-acetylmannosamine-6-phosphate 2-epimerase|N-acetyl-β-neuraminate lyase / N-acetylneuraminate lyase
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H2O|D-glucosamine 6-phosphate|N-acetyl-D-glucosamine 6-phosphate|β-D-fructofuranose 6-phosphate|N-acetyl-D-mannosamine 6-phosphate|acetate|α-D-glucosamine 6-phosphate|H+|ammonium|N-acetyl-D-mannosamine|pyruvate
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50
|
|
glycogen degradation I
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GLYCOCAT-PWY
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limit dextrin α-1,6-glucohydrolase|maltodextrin glucosidase|glucosamine kinase / glucokinase|amylomaltase|maltodextrin phosphorylase|maltodextrin glucosidase malZ|limit dextrin α-1,6-glucohydrolase glgX|phosphoglucomutase|glycogen phosphorylase
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H2O|α-D-glucopyranose 1-phosphate|maltotriose|H+|phosphate|D-glucopyranose 6-phosphate|maltotetraose
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49
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|
polyisoprenoid biosynthesis (E. coli)
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POLYISOPRENSYN-PWY
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undecaprenyl diphosphate synthase|undecaprenyl pyrophosphate phosphatase|undecaprenyl diphosphate synthase [IspU]2|isopentenyl diphosphate isomerase|geranyl diphosphate synthase / farnesyl diphosphate synthase|phosphatidylglycerophosphatase [multifunctional]|octaprenyl diphosphate synthase
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H2O|di-trans,octa-cis-undecaprenyl phosphate|dimethylallyl diphosphate|diphosphate|all-trans-octaprenyl diphosphate|isopentenyl diphosphate|di-trans,octa-cis-undecaprenyl diphosphate|H+|phosphate|geranyl diphosphate|(2E,6E)-farnesyl diphosphate
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49
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streptomycin biosynthesis
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PWY-5940
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dTDP-L-dihydrostreptose:streatidine-6-phosphate dihydrostreptosyltransferase|L-glutamine:2-keto-myo-inositol aminotransferase|dTDP-L-dihydrostreptose:streatidine-6-phosphate dihydrostreptosyltransferase [dTDP-L-dihydrostreptose:streatidine-6-phosphate dihydrostreptosyltransferase subunit]2|ATP:inosamime phosphotransferase|streptomycin 6-kinase strA|1-guanidino-1-deoxy-scyllo-inositol 4-phosphate phosphatase|L-arginine:inosamine-phosphate amidinotransferase|dihydrostreptomycin-6-phosphate oxidoreductase|L-glutamine:2-keto-myo-inositol aminotransferase [StsC]2|streptomycin 6-kinase|N-methyl-L-glucosaminyltransferase|L-alanine:D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol transaminase|L-arginine:inosamine-phosphate amidinotransferase strB1|α-D-glucose-1-phosphate cytidylyltransferase [AscA]4|streptomycin-6-phosphatase strK|streptomycin-6-phosphatase
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L-glutamine|dTDP-β-L-rhamnose|L-ornithine|O-1,4-α-L-dihydrostreptosyl-streptidine 6-phosphate|1-guanidino-1-deoxy-scyllo-inositol|myo-inositol|H2O|NAD+|1-amino-1-deoxy-scyllo-inositol 4-phosphate|L-alanine|streptomycin|D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol|phosphate|pyruvate|N1-amidinostreptamine 6-phosphate|CDP-α-D-glucose|1-amino-1-deoxy-scyllo-inositol|streptidine 6-phosphate|D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol|dihydrostreptomycin 6-phosphate|scyllo-inosose|L-arginine|CDP-N-methyl-L-glucosamine|streptomycin 6-phosphate|diphosphate|α-D-glucopyranose 1-phosphate|1-guanidino-1-deoxy-scyllo-inositol 4-phosphate|2-oxoglutaramate|dTDP-L-dihydrostreptose|H+|D-glucopyranose 6-phosphate|NADH
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48
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|
cutin biosynthesis
|
PWY-321
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ω-hydroxy fatty acid ω-alcohol dehydrogenase HTH|ω-hydroxy fatty acid ω-alcohol dehydrogenase|fatty acid epoxide hydrolase|PHYLLO [multifunctional]|fatty acid ω-hydroxylase|lauroyl-CoA thioesterase [multifunctional]|long-chain fatty acid ω-hydroxylase|16-hydroxypalmitoyl-CoA synthetase|fatty acid peroxygenase (fatty acid hydroperoxide-dependent)
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NADPH|a hydroperoxy-fatty-acyl-lipid|16-oxo-palmitate|18-hydroxyoleate|H2O|palmitate|NADP+|hexadecanedioate|(9R,10S)-dihydroxystearate|a hydroxy-fatty-acyl-lipid|10,16-dihydroxypalmitoyl-CoA|oleoyl-CoA|16-hydroxypalmitate|18-oxo-oleate|oxygen|coenzyme A|9,10-epoxystearate|α,ω-9Z-octadecenedioate|palmitoyl-CoA|diphosphate|16-hydroxypalmitoyl-CoA|oleate|9,10,18-trihydroxystearate|H+|9,10-epoxy-18-hydroxystearate
|
48
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