|
chorismate biosynthesis from 3-dehydroquinate
|
PWY-6163
|
shikimate kinase|shikimate kinase II|shikimate dehydrogenase / quinate dehydrogenase|chorismate synthase|3-dehydroquinate dehydratase|shikimate 5-dehydrogenase|shikimate dehydrogenase / quinate dehydrogenase [YdiB]2|3-phosphoshikimate-1-carboxyvinyltransferase|pentafunctional AROM polypeptide|shikimate dehydrogenase|5-enolpyruvoylshikimate-3-phosphate synthase
|
H2O|NADPH|shikimate|NADP+|phosphoenolpyruvate|3-dehydroshikimate|chorismate|shikimate 3-phosphate|3-dehydroquinate|H+|phosphate|5-enolpyruvoyl-shikimate 3-phosphate
|
70
|
|
chorismate biosynthesis II (archaea)
|
PWY-6165
|
triosephosphate isomerase|triosephosphate isomerase [TpiA]2|shikimate kinase|6-deoxy-5-ketofructose 1-phosphate synthase|3-dehydroquinate dehydratase|shikimate dehydrogenase / quinate dehydrogenase [YdiB]2|6-deoxy-5-ketofructose 1-phosphate synthase [MJ1585]|shikimate dehydrogenase|dehydroquinate synthase II
|
NADPH|methylglyoxal|shikimate 3-phosphate|fructose 1,6-bisphosphate|chorismate|ammonium|6-deoxy-5-ketofructose 1-phosphate|H2O|NAD+|2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate|NADP+|3-dehydroshikimate|D-glyceraldehyde 3-phosphate|phosphate|enolaldehyde|shikimate|phosphoenolpyruvate|5-enolpyruvoyl-shikimate 3-phosphate|hydroxypyruvaldehyde phosphate|L-aspartate-semialdehyde|3-dehydroquinate|H+|NADH
|
70
|
|
L-phenylalanine degradation IV (mammalian, via side chain)
|
PWY-6318
|
mitochondrial aldehyde dehydrogenase|phenylacetyl-coenzyme A:glycine N-acyltransferase GAT|4-trimethylaminobutyraldehyde dehydrogenase|fatty aldehyde dehydrogenase|monoamine oxidase B [MAOB]2|glutamine N-phenylacetyltransferase|4-hydroxyphenylpyruvate dioxygenase|monoamine oxidase B|phenylacetyl-coenzyme A:glycine N-acyltransferase|4-hydroxyphenylpyruvate dioxygenase [HPD]2|mitochondrial aspartate aminotransferase|aromatic L-amino acid decarboxylase
|
2-phenylethylamine|glycine|L-glutamine|α-N-phenylacetyl-L-glutamine|ammonium|2-hydroxyphenylacetate|H2O|NAD+|L-glutamate|phenyllactate|CO2|L-phenylalanine|phenylacetate|phenylacetaldehyde|hydrogen peroxide|phenylacetylglycine|oxygen|coenzyme A|phenylacetyl-CoA|diphosphate|2-oxo-3-phenylpropanoate|H+|2-oxoglutarate|NADH
|
69
|
|
stachyose degradation
|
PWY-6527
|
alkaline α- galactosidase|galactose-1-phosphate uridylyltransferase|alkaline α-galactosidase|UDP-galactose pyrophosphorylase|UDP-glucose pyrophosphorylase / UDP-galactose pyrophosphorylase|UDP-galactose/glucose pyrophosphorylase|raffinose galactohydrolase|galactokinase
|
H2O|sucrose|stachyose|diphosphate|α-D-galactose|UDP-α-D-galactose|raffinose|α-D-glucopyranose 1-phosphate|H+|α-D-galactose 1-phosphate|UDP-α-D-glucose
|
69
|
|
gallate degradation III (anaerobic)
|
P3-PWY
|
pyrogallol transhydroxylase [pyrogallol transhydroxylase subunit]2|butyryl-CoA dehydrogenase|dihydrophloroglucinol hydrolase|3-hydroxy-5-oxohexanoyl-CoA thiolase|acetate CoA-transferase|acetate kinase|pyrogallol transhydroxylase|phloroglucinol reductase [phloroglucinol reductase subunit]2|gallate decarboxylase|phosphate acetyltransferase|enoyl-CoA hydratase|phloroglucinol reductase
|
acetyl phosphate|acetate|NADPH|3-hydroxy-5-oxohexanoate|acetyl-CoA|butanoate|gallate|H2O|1,2,3,5-tetrahydroxybenzene|NADP+|3-hydroxy-5- oxohexanoyl-CoA|dihydrophloroglucinol|(S)-3-hydroxybutanoyl-CoA|pyrogallol|H+|phosphate|phloroglucinol|butanoyl-CoA|CO2|crotonyl-CoA|coenzyme A
|
69
|
|
reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
|
CODH-PWY
|
NADP-dependent formate dehydrogenase|ferredoxin-dependent methylenetetrahydrofolate reductase|methenyltetrahydrofolate cyclohydrolase [multifunctional]|carbon monoxide dehydrogenase/acetyl-CoA synthase β subunit, subunit of carbon monoxide dehydrogenase/acetyl-CoA synthase complex|NADP-dependent formate dehydrogenase [FdhA]2[FdhB]2|methylene tetrahydrofolate reductase|5,10-methylenetetrahydrofolate reductase|ferredoxin-dependent methylenetetrahydrofolate reductase [methylenetetrahydrofolate reductase (ferredoxin) α subunit]4[methylenetetrahydrofolate reductase (ferredoxin) β subunit]4|methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase|formyltetrahydrofolate synthetase|carbon monoxide dehydrogenase/acetyl-CoA synthase α subunit dimer, subunit of carbon monoxide dehydrogenase/acetyl-CoA synthase complex|methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase [AcsE]2
|
H2O|a 5,10-methylene-tetrahydrofolate|NAD+|phosphate|acetyl-CoA|carbon monoxide|a tetrahydrofolate|a 5,10-methenyltetrahydrofolate|NADP+|CO2|an N10-formyl-tetrahydrofolate|H+|an N5-methyl-tetrahydrofolate|NADPH|formate|NADH|coenzyme A
|
69
|
|
UMP biosynthesis
|
PWY-5686
|
dihydroorotate dehydrogenase, type 2 pyrD|UMP synthase|dihydroorotase|carbamoyl phosphate synthetase|dihydroorotate dehydrogenase, type 2|orotate phosphoribosyltransferase|aspartate carbamoyltransferase|aspartate transcarbamylase|CAD protein
|
carbamoyl phosphate|H2O|L-glutamine|hydrogen carbonate|diphosphate|L-aspartate|orotate|L-glutamate|(S)-dihydroorotate|H+|phosphate|5-phospho-α-D-ribose 1-diphosphate|CO2|orotidine 5-phosphate|N-carbamoyl-L-aspartate
|
68
|
|
superpathway of L-methionine salvage and degradation
|
PWY-5328
|
cystathionine β-synthase|methylmalonyl-CoA mutase|DL-methylmalonyl-CoA racemase|branched-chain α-keto acid dehydrogenase complex|cystathionine beta-synthase|betaine-homocysteine S-methyltransferase|S-adenosylhomocysteine hydrolase|methylmalonyl CoA epimerase|propionyl-CoA carboxylase|aspartate aminotransferase 1|cystathionine gamma-lyase|2-iminobutanoate/2-iminopropanoate deaminase [RidA]3|methionine synthase|cystathionine γ-lyase|S-methylmethionine homocysteine methyltransferase|sulfite oxidase|betaine--homocysteine S-methyltransferase|aspartate transaminase [multifunctional]|cysteine dioxygenase|methionine adenosyltransferase
|
S-adenosyl-L-methionine|(S)-methylmalonyl-CoA|sulfate|dimethylglycine|an N5-methyl-tetrahydrofolate|ammonium|L-cysteine|H2O|NAD+|adenosine|a tetrahydrofolate|L-homocysteine|hydrogen carbonate|S-methyl-L-methionine|sulfite|L-glutamate|glycine betaine|propanoyl-CoA|pyruvate|CO2|L-cystathionine|L-serine|L-methionine|3-sulfinopyruvate|3-sulfinoalanine|phosphate|(2Z)-2-aminobut-2-enoate|oxygen|coenzyme A|(R)-methylmalonyl-CoA|2-iminobutanoate|hydrogen peroxide|diphosphate|S-adenosyl-L-homocysteine|2-oxobutanoate|H+|succinyl-CoA|2-oxoglutarate|NADH
|
68
|
|
urea cycle
|
PWY-4984
|
argininosuccinate synthase|argininosuccinate lyase|ornithine carbamoyltransferase|CAD protein|ammonia-dependent carbamoyl-phosphate synthase|arginase 2|arginase 1
|
fumarate|H2O|carbamoyl phosphate|ammonium|urea|diphosphate|L-ornithine|L-aspartate|L-arginine|L-citrulline|H+|phosphate|L-arginino-succinate|hydrogen carbonate
|
68
|
|
incomplete reductive TCA cycle
|
P42-PWY
|
pyruvate carboxylase|succinate-CoA ligase|fumarate hydratase|fumarate reductase|2-oxoglutarate synthase|pyruvate synthase|malate dehydrogenase
|
fumarate|H2O|NAD+|acetyl-CoA|2-oxoglutarate|succinate|(S)-malate|hydrogen carbonate|CO2|oxaloacetate|H+|succinyl-CoA|phosphate|pyruvate|NADH|coenzyme A
|
68
|