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chitin degradation to ethanol
|
PWY-7118
|
chitin deacetylase 1|pyruvate decarboxylase 3|pyruvate decarboxylase 2|acetyl CoA synthetase 1|NAD-dependent malic enzyme, mitochondrial|malate synthase 1|acetyl CoA synthetase 2|alcohol dehydrogenase III|alcohol dehydrogenase V|chitin deacetylase 2|alcohol dehydrogenase II|alcohol dehydrogenase I|pyruvate decarboxylase 1
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acetate|NAD+|acetyl-CoA|diphosphate|(S)-malate|H2O|glyoxylate|CO2|H+|acetaldehyde|pyruvate|NADH|ethanol|coenzyme A
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128
|
|
fatty acid salvage
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PWY-7094
|
fatty acid oxidation complex α subunit dimer|medium-chain acyl-CoA dehydrogenase|long-chain-fatty-acid--CoA ligase|β-ketodecanoyl-[acyl-carrier-protein] synthase PA3286|medium-chain-fatty-acid--CoA ligase|fatty acid oxidation complex β subunit dimer|β-ketodecanoyl-[acyl-carrier-protein] synthase
|
H2O|trans-dec-2-enoyl-CoA|NAD+|(S)-3-hydroxydecanoyl-CoA|acetyl-CoA|decanoyl-CoA|diphosphate|decanoate|3-oxodecanoyl-CoA|CO2|octanoyl-CoA|H+|NADH|coenzyme A
|
128
|
|
Entner-Doudoroff pathway III (semi-phosphorylative)
|
PWY-2221
|
pyruvate kinase|aldose 1-dehydrogenase|2-keto-3-deoxy-6-phosphogluconate aldolase|galactonate dehydratase / gluconate dehydratase|2-keto-3-deoxy-gluconate kinase|NAD+-dependent glyceraldehyde-3-phosphate dehydrogenase|gluconate dehydratase|glucose dehydrogenase|NAD+-dependent glyceraldehyde-3-phosphate dehydrogenase [GapN]4
|
D-gluconate|H2O|NAD+|3-phospho-D-glycerate|2-phospho-D-glycerate|NADP+|phosphoenolpyruvate|2-dehydro-3-deoxy-D-gluconate 6-phosphate|D-glyceraldehyde 3-phosphate|2-dehydro-3-deoxy-D-gluconate|H+|NADPH|pyruvate|NADH|D-glucono-1,5-lactone
|
128
|
|
formaldehyde assimilation II (RuMP Cycle)
|
PWY-1861
|
transaldolase [TalB]2|6-phospho-3-hexuloisomerase|hexulose-6-phosphate synthase
|
D-ribulose 5-phosphate|D-xylulose 5-phosphate|D-erythrose 4-phosphate|formaldehyde|D-glyceraldehyde 3-phosphate|hexulose 6-phosphate|fructose 1,6-bisphosphate|glycerone phosphate|β-D-fructofuranose 6-phosphate|D-sedoheptulose 7-phosphate|H+
|
127
|
|
superpathway of glyoxylate bypass and TCA
|
TCA-GLYOX-BYPASS
|
malate synthase A|succinate:quinone oxidoreductase|malate dehydrogenase|fumarase B|malate:quinone oxidoreductase|isocitrate dehydrogenase|2-oxoglutarate dehydrogenase complex|aconitate hydratase 1|fumarase A|fumarase C|succinyl-CoA synthetase|isocitrate lyase|malate:quinone oxidoreductase mqo|bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase|citrate synthase
|
fumarate|H2O|NADPH|phosphate|acetyl-CoA|2-oxoglutarate|(S)-malate|citrate|NADP+|glyoxylate|CO2|oxaloacetate|D-threo-isocitrate|H+|succinyl-CoA|NAD+|cis-aconitate|succinate|NADH|coenzyme A
|
126
|
|
TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
|
PWY-6969
|
isocitrate dehydrogenase|aconitase|Succinyl-CoA ligase [ADP-forming]|isocitrate lyase|fumarase|succinate dehydrogenase|malate synthase|succinate dehydrogenase sdhA|malate dehydrogenase|2-oxoglutarate:ferredoxin oxidoreductase|citrate synthase
|
fumarate|H2O|NADPH|phosphate|acetyl-CoA|2-oxoglutarate|(S)-malate|citrate|NADP+|glyoxylate|CO2|oxaloacetate|L-glutamate|D-threo-isocitrate|H+|succinyl-CoA|NAD+|cis-aconitate|succinate|NADH|coenzyme A
|
125
|
|
L-lysine biosynthesis I
|
DAPLYSINESYN-PWY
|
aspartate semialdehyde dehydrogenase|tetrahydrodipicolinate succinylase|tetrahydrodipicolinate succinylase [DapD]2|N-succinyl-L-diaminopimelate desuccinylase|3-phosphoserine aminotransferase [multifunctional]|diaminopimelate epimerase|4-hydroxy-tetrahydrodipicolinate synthase|aspartate kinase III|N-succinyldiaminopimelate-aminotransferase|diaminopimelate decarboxylase|N-succinyl-L,L-diaminopimelate desuccinylase|4-hydroxy-tetrahydrodipicolinate reductase|aspartokinase|N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase
|
NADPH|L,L-diaminopimelate|N-succinyl-2-amino-6-ketopimelate|H2O|NADP+|L-glutamate|phosphate|pyruvate|CO2|(S)-2,3,4,5-tetrahydrodipicolinate|meso-diaminopimelate|L-aspartyl-4-phosphate|L-lysine|succinate|coenzyme A|N-succinyl-L,L-2,6-diaminopimelate|L-aspartate-semialdehyde|L-aspartate|H+|succinyl-CoA|2-oxoglutarate|(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
|
124
|
|
fatty acid β-oxidation II (peroxisome)
|
PWY-5136
|
MFP a|multifunctional protein MFP III|peroxisomal fatty acid β-oxidation multifunctional protein MFP2|multifunctional protein MFP II|multifunctional protein MFP I|long-chain acyl-CoA synthetase 7|peroxisomal fatty acid β-oxidation multifunctional protein AIM1|long-chain acyl-CoA synthetase 6|OPC4-3-ketoacyl-CoA thiolase [multifunctional]
|
H2O|a trans-2-enoyl-CoA|NAD+|acetyl-CoA|diphosphate|hydrogen peroxide|H+|a 2,3,4-saturated fatty acid|NADH|oxygen|coenzyme A
|
124
|
|
fatty acid β-oxidation VI (peroxisome)
|
PWY66-391
|
long-chain acyl-CoA synthetase 3|peroxisomal multifunctional enzyme type 2|peroxisomal acyl-coenzyme A oxidase 2|peroxisomal 3-ketoacyl-CoA thiolase|peroxisomal bifunctional enzyme|Non-specific lipid-transfer protein|long-chain-fatty-acid--CoA ligase 1|peroxisomal acyl-coenzyme A oxidase 1|very long-chain acyl-CoA synthetase
|
H2O|a trans-2-enoyl-CoA|NAD+|acetyl-CoA|diphosphate|hydrogen peroxide|H+|a 2,3,4-saturated fatty acid|NADH|oxygen|coenzyme A
|
124
|
|
adenosylcobalamin biosynthesis I (anaerobic)
|
PWY-5507
|
cobalt-precorrin-7 (C5)-methyltransferase|cobalt-precorrin-6A reductase|cobalt-precorrin-7 (C5)-methyltransferase cbiE|cobalt precorrin-4 (C11)-methyltransferase cbiF|precorrin-2 dehydrogenase|cobalt-precorrin 3 methyltransferase [multifunctional] cbiH60|cobalt-precorrin 5A hydrolase cbiG|cobalt-sirohydrochlorin (C20)-methyltransferase [multifunctional]|cobalt-sirohydrochlorin (C20)-methyltransferase [multifunctional] [CbiL]2|uroporphyrinogen-III (C7)-methyltransferase [multifunctional]|nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase|cobalt precorrin-4 (C11)-methyltransferase|sirohydrochlorin cobaltochelatase|adenosyl-cobyrate synthase|L-threonine kinase|L-threonine kinase pduX|cobalt-precorrin-3 (C17)-methyltransferase|cobalt-precorrin-6A synthase cbiD|aquacobalamin reductase / FMN reductase|cobalt-precorrin 3 methyltransferase [multifunctional]|cobalt-precorrin-6B (C15)-methyltransferase [decarboxylating]|CobA|L-threonine-O-3-phosphate decarboxylase|cobalt-precorrin-8 methylmutase|adenosylcobinamide-phosphate synthase|5,6-dimethylbenzimidazole synthase bluB|cobaltochelatase|glutamate-1-semialdehyde 2,1-aminomutase|cobalt-precorrin-6A synthase|CobU|cobalt-precorrin-6B (C15)-methyltransferase [decarboxylating] [CbiT]4|flavodoxin A|cobyrinate a,c-diamide synthase|cobalt-precorrin 5A hydrolase
|
S-adenosyl-L-methionine|NADPH|cobalt-precorrin-6A|L-glutamine|uroporphyrinogen-III|cob(I)yrinate a,c-diamide|adenosylcobinamide-GDP|sirohydrochlorin|ammonium|dialurate|Co2+|H2O|NAD+|cobalt-precorrin-5B|L-threonine 3-O-phosphate|PPPi|NADP+|cob(II)yrinate a,c-diamide|acetaldehyde|precorrin-2|L-glutamate|adenosyl-cobyrinate a,c-diamide|(S)-4-amino-5-oxopentanoate|phosphate|adenosyl-cobinamide phosphate|CO2|cobalt-factor III|cobalt-precorrin-3|D-erythrose 4-phosphate|preuroporphyrinogen|cobalt-precorrin-6B|cobalt-precorrin-7|precorrin-1|nicotinate|adenosylcobalamin 5-phosphate|cobalt-sirohydrochlorin|L-threonine|5,6-dimethylbenzimidazole|FMNH2|adenosylcobyrate|(R)-1-amino-2-propanol O-2-phosphate|oxygen|β-nicotinate D-ribonucleotide|α-ribazole 5-phosphate|porphobilinogen|diphosphate|cobalt-precorrin-8|cobalt-precorrin-4|riboflavin|cobyrinate|H+|S-adenosyl-L-homocysteine|5-aminolevulinate|NADH|cobalt-precorrin-5A
|
123
|