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L-arginine biosynthesis IV (archaebacteria)
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PWY-7400
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[LysW}-glutamate/[LysW]-aminoadipate kinase lysZ|L-2-aminoadipate carrier protein]-lysine/ornithine hydrolase|glutamate--LysW ligase|L-ornithine carbamoyltransferase|[LysW]-aminoadipate semialdehyde/glutamate semialdehyde transaminase lysJ|[LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate reductase lysY|glutamate--LysW ligase [ArgX]4|L-2-aminoadipate carrier protein]-lysine/ornithine hydrolase lysK|[LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate reductase|[LysW]-aminoadipate semialdehyde/glutamate semialdehyde transaminase|[LysW}-glutamate/[LysW]-aminoadipate kinase
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fumarate|H2O|an L-2-aminoadipate carrier protein-L-glutamate 5-phosphate|NADPH|carbamoyl phosphate|L-ornithine|L-arginino-succinate|L-glutamine|hydrogen carbonate|NADP+|L-aspartate|an L-2-aminoadipate carrier protein-L-ornithine|L-arginine|an L-2-aminoadipate carrier protein-L-glutamate 5-semialdehyde|L-glutamate|L-citrulline|H+|phosphate|an L-2-aminoadipate carrier protein-L-glutamate|2-oxoglutarate|diphosphate
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142
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pyrimidine deoxyribonucleotides de novo biosynthesis II
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PWY-7187
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dCTP deaminase|ribonucleoside-triphosphate reductase, subunit of anaerobic nucleoside-triphosphate reductase activating system|ribonucleoside-triphosphate reductase [NrdD]2|nucleoside diphosphate kinase|thymidylate synthase|thymidylate kinase|dTMP kinase|nucleoside triphosphate pyrophosphohydrolase|deoxyuridine triphosphatase|pyrimidine deoxynucleoside triphosphate pyrophosphohydrolase
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H2O|diphosphate|H+|ammonium|a 5,10-methylene-tetrahydrofolate|a 7,8-dihydrofolate
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142
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glycerol degradation to butanol
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PWY-7003
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butyryl-CoA dehydrogenase|NADH-dependent butanol dehydrogenase B|alcohol/aldehyde dehydrogenase|NADH-dependent butanol dehydrogenase A|pyruvate:ferredoxin oxidoreductase|3-hydroxybutyryl-CoA dehydratase|3-hydroxybutyryl-CoA dehydrogenase|acetyl-CoA C-acetyltransferase|NADPH-dependent butanol dehydrogenas|aldehyde/alcohol dehydrogenase
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NADPH|(S)-3-hydroxybutanoyl-CoA|glycerol|butanoyl-CoA|crotonyl-CoA|H2O|NAD+|acetyl-CoA|1-butanol|dihydroxyacetone|NADP+|acetoacetyl-CoA|phosphate|1,3-bisphospho-D-glycerate|1-butanal|CO2|D-glyceraldehyde 3-phosphate|phosphoenolpyruvate|coenzyme A|3-phospho-D-glycerate|pyruvate|2-phospho-D-glycerate|glycerone phosphate|H+|NADH
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141
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L-arginine biosynthesis III (via N-acetyl-L-citrulline)
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PWY-5154
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acetylcitrulline deacetylase [ArgE]2|acetylcitrulline deacetylase
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N-acetyl-L-glutamate 5-semialdehyde|fumarate|NADPH|L-glutamine|NADP+|L-arginino-succinate|N-acetylglutamyl-phosphate|H2O|N-acetyl-L-citrulline|acetyl-CoA|hydrogen carbonate|L-glutamate|N-acetyl-L-glutamate|coenzyme A|acetate|L-arginine|phosphate|N-acetyl-L-ornithine|carbamoyl phosphate|diphosphate|L-aspartate|L-citrulline|H+|2-oxoglutarate
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140
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|
folate transformations II
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PWY-3841
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10-formyltetrahydrofolate synthetase|dihydrofolate reductase / thymidylate synthase|5,10-methylenetetrahydrofolate dehydrogenase [multifunctional]|glycine decarboxylase|5-formyltetrahydrofolate cycloligase|dihydrofolate reductase/thymidylate synthase|5,10-methylenetetrahydrofolate reductase|serine hydroxymethyltransferase
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L-methionine|H2O|L-serine|NADPH|phosphate|glycine|ammonium|a tetrahydrofolate|L-homocysteine|NADP+|CO2|a 5,10-methylene-tetrahydrofolate|a 7,8-dihydrofolate|an N10-formyl-tetrahydrofolate|H+|an N5-methyl-tetrahydrofolate|NAD+|formate|NADH|an (6S)-N5-formyl-tetrahydrofolate|a 5,10-methenyltetrahydrofolate
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140
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superpathway of L-citrulline metabolism
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PWY-5004
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argininosuccinate synthase|proline dehydrogenase 2|eNOS|arginase|argininosuccinate lyase|ornithine carbamoyltransferase|proline dehydrogenase 1|CAD protein|δ-1-pyrroline-5-carboxylate synthase|glutaminase, kidney isoform|ammonia-dependent carbamoyl-phosphate synthase|iNOS|arginase 2|ornithine-δ-aminotransferase|nNOS|mitochondrial proline dehydrogenase 1|arginase 1|ornithine aminotransferase|δ1-pyrroline-5-carboxylate synthetase
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fumarate|(S)-1-pyrroline-5-carboxylate|NADPH|L-glutamine|γ-L-glutamyl 5-phosphate|NADP+|L-ornithine|ammonium|L-arginino-succinate|H2O|hydrogen carbonate|L-glutamate|phosphate|urea|nitric oxide|L-proline|L-arginine|oxygen|carbamoyl phosphate|diphosphate|L-aspartate|L-glutamate-5-semialdehyde|L-citrulline|H+|2-oxoglutarate
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139
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pyruvate fermentation to isobutanol (engineered)
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PWY-7111
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pyruvate decarboxylase 3|pyruvate decarboxylase 2|alcohol dehydrogenase IV|alcohol dehydrogenase V|acetohydroxy acid isomeroreductase|acetolactate synthase / acetohydroxybutanoate synthase|acetohydroxybutanoate synthase / acetolactate synthase|dihydroxy acid dehydratase|alcohol dehydrogenase III|alcohol dehydrogenase II|pyruvate decarboxylase 1|alcohol dehydrogenase I|α-ketoisovalerate decarboxylase
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(2R)-2,3-dihydroxy-3-methylbutanoate|3-methyl-2-oxobutanoate|H2O|NAD+|(S)-2-acetolactate|NADP+|CO2|isobutanal|H+|NADPH|pyruvate|NADH|isobutanol
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138
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|
Calvin-Benson-Bassham cycle
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CALVIN-PWY
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fructose-1,6-bisphosphatase class 1|D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase [Slr2094]4|phosphoglycerate kinase|triosephosphate isomerase|fructose-bisphosphate aldolase / sedoheptulose-1,7-bisphosphate aldolase|transketolase|glyceraldehyde 3-phosphate dehydrogenase 2|fructose 1,6-bisphosphatase|phosphoribulokinase|chloroplastic glyceraldehyde 3-phosphate dehydrogenase|ribose 5-phosphate isomerase|D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase|pentose-5-phosphate 3-epimerase|ribulose bisphosphate carboxylase/oxygenase
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D-ribulose 5-phosphate|D-xylulose 5-phosphate|H2O|NADPH|3-phospho-D-glycerate|β-D-fructofuranose 6-phosphate|D-glyceraldehyde 3-phosphate|NADP+|glycerone phosphate|D-sedoheptulose 7-phosphate|fructose 1,6-bisphosphate|D-sedoheptulose-1,7-bisphosphate|D-ribulose-1,5-bisphosphate|H+|D-erythrose 4-phosphate|phosphate|CO2|1,3-bisphospho-D-glycerate
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138
|
|
pentose phosphate pathway
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PENTOSE-P-PWY
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6-phosphogluconate dehydrogenase|transaldolase|ribose-5-phosphate isomerase A|allose-6-phosphate isomerase / ribose-5-phosphate isomerase B|transketolase II|6-phosphogluconolactonase|ribulose-5-phosphate 3-epimerase|transketolase I|glucose 6-phosphate-1-dehydrogenase|transaldolase [TalB]2
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D-ribulose 5-phosphate|D-xylulose 5-phosphate|H2O|NADPH|β-D-fructofuranose 6-phosphate|D-gluconate 6-phosphate|NADP+|D-sedoheptulose 7-phosphate|D-glyceraldehyde 3-phosphate|H+|D-erythrose 4-phosphate|6-phospho D-glucono-1,5-lactone|D-glucopyranose 6-phosphate|CO2
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138
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|
superpathway of pyrimidine ribonucleosides salvage
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PWY-7196
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CTP synthase|ribonucleoside hydrolase 2 (pyrimidine-specific)|UMP kinase|uridylate kinase|nucleoside diphosphate kinase|ribonucleoside hydrolase 3|cytidylate kinase|uracil phosphoribosyltransferase|uridine kinase / cytidine kinase|uridine kinase|cytidine deaminase|UMP/CMP kinase|nucleoside-diphosphate kinase 1|ribonucleoside hydrolase 1 (pyrimidine-specific)|ribonucleoside hydrolase (pyrimidine-specific)|ribonucleoside hydrolase
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H2O|ammonium|L-glutamine|H+|L-glutamate|cytidine|phosphate|uracil|uridine|5-phospho-α-D-ribose 1-diphosphate|diphosphate|D-ribofuranose
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137
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