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| 자생머루 Resequencing | ||||||
| year | raw data | read # | total SNP # (ref.) | homotype SNP # | heterotype SNP # | |
|---|---|---|---|---|---|---|
| 2011 | Meoroo (Vitis coignetia) | 173,099,656 | 5,309,505 | 4,396,624 | 912,881 | |
| Saemuroo (Vitis flexuosa) | 418,833,328 | 5,543,658 | 3,743,186 | 1,800,472 | ||
| Wangmuroo (Vitis amurensis) | 157,422,832 | 5,153,856 | 4,095,185 | 1,058,671 | ||
| 2012 | Meoroo (Vitis coignetia) | 132,547,978 | 4,865,155 | 3,932,645 | 932,510 | |
| Saemuroo (Vitis flexuosa) | 133,344,694 | 4,723,472 | 3,883,372 | 840,100 | ||
| Wangmuroo (Vitis amurensis) | 155,855,936 | 5,046,320 | 3,959,032 | 1,087,288 | ||
| De novo assembly | ||||||
| raw data | read # | avg. read length | length (bp) | trimmed read # | trimmed avg. read length | trimmed length (bp) |
|---|---|---|---|---|---|---|
| Saemuroo 200bp | 127,188,880 | 101 | 12,846,076,880 | 115,568,744 | 84.95 | 9,818,702,366 |
| Saemuroo 500 | 418,833,328 | 101 | 42,302,166,128 | 284,182,234 | 80.2 | 22,792,040,572 |
| Saemuroo 2kb | 176,096,806 | 101 | 17,785,777,406 | 147,415,748 | 83.6 | 12,324,295,540 |
| Saemuroo 5kb | 153,313,768 | 101 | 15,484,690,568 | 115,520,514 | 83 | 9,595,357,574 |
